smftools.tools.partitioned_spatial

Bounded spatial analysis over partitioned preprocessing outputs.

Functions

execute_partitioned_spatial(spine_path, cfg, ...)	Run bounded spatial analysis and publish a linked thin spine.
execute_spatial_task(spine_path, task, cfg, ...)	Compute one barcode/reference/window spatial partial.

smftools.tools.partitioned_spatial.execute_spatial_task(spine_path, task, cfg, output_dir)

Compute one barcode/reference/window spatial partial.

Return type:

dict[str, object]

smftools.tools.partitioned_spatial.execute_partitioned_spatial(spine_path, cfg, output_dir)

Run bounded spatial analysis and publish a linked thin spine.

Return type:

dict[str, Path]