smftools.analysis.config.hmm_histogram

smftools.analysis.config.hmm_histogram#

Per-feature-type binning, rolling-mean, and peak-calling config for HMM feature histograms.

HISTOGRAM_CONFIGS[feature_layer_name][hist_type] returns a dict or None.

hist_type is one of "count", "size", or "neighbor_distance". Each dict may contain bin_size_bp, rolling_window_bp, peak_kwargs, rolling_color, peak_color, and optionally gaussian_fit.